{ "_id": "6a215b62cd65a98ecbd2f01f", "Package": "NetInt", "Type": "Package", "Title": "Methods for Unweighted and Weighted Network Integration", "Version": "1.0.1", "Authors@R": "c(\nperson(\"Giorgio\", \"Valentini\", email = \"valentini@di.unimi.it\", role = \"aut\"),\nperson(\"Jessica\", \"Gliozzo\", email = \"jessica.gliozzo@unimi.it\", role = \"cre\"))", "Maintainer": "Jessica Gliozzo ", "Description": "Implementation of network integration approaches\ncomprising unweighted and weighted integration methods.\nUnweighted integration is performed considering the average,\nper-edge average, maximum and minimum of networks edges.\nWeighted integration takes into account a weight for each\nnetwork during the fusion process, where the weights express\nthe ''predictiveness strength'' of each network considering a\nspecific predictive task. Weights can be learned using a\nmachine learning algorithm able to associate the weights to the\nassessment of the accuracy of the learning algorithm trained on\nthe network itself. The implemented methods can be applied to\neffectively integrate different biological networks modelling a\nwide range of problems in bioinformatics (e.g. disease gene\nprioritization, protein function prediction, drug repurposing,\nclinical outcome prediction).", "License": "GPL (>= 2)", "Encoding": "UTF-8", "RoxygenNote": "7.2.3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-04 10:59:35 UTC", "User": "root" }, "Author": "Giorgio Valentini [aut], Jessica Gliozzo [cre]", "Repository": "https://jessicagliozzo.r-universe.dev", "Date/Publication": "2025-05-03 16:30:02 UTC", "RemoteUrl": "https://github.com/cran/NetInt", "RemoteRef": "HEAD", "RemoteSha": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "MD5sum": "e09634b253ad2ee2e7e2b663d07514f8", "_user": "jessicagliozzo", "_type": "src", "_file": "NetInt_1.0.1.tar.gz", "_fileid": "49c50fd39f49961734eac70514856befdb13d7e010dc6cefc6f5f4bc5c26d10b", "_filesize": 339772, "_sha256": "49c50fd39f49961734eac70514856befdb13d7e010dc6cefc6f5f4bc5c26d10b", "_created": "2026-06-04T10:59:35.000Z", "_published": "2026-06-04T11:02:58.605Z", "_distro": "noble", "_jobs": [ { "job": 79504365397, "time": 117, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7409734355" }, { "job": 79504365353, "time": 100, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7409728842" }, { "job": 79504365368, "time": 166, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7409739833" }, { "job": 79504365351, "time": 132, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7409730324" }, { "job": 79504027371, "time": 133, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7409697849" }, { "job": 79504365441, "time": 95, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7409727738" }, { "job": 79504365461, "time": 86, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7409725091" }, { "job": 79504365401, "time": 57, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7409716195" }, { "job": 79504365437, "time": 58, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7409716526" } ], "_buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/NetInt", "_commit": { "id": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "author": "Jessica Gliozzo ", "committer": "cran-robot ", "message": "version 1.0.1\n", "time": 1746289802 }, "_maintainer": { "name": "Jessica Gliozzo", "email": "jessica.gliozzo@unimi.it", "login": "jessicagliozzo", "description": "", "uuid": 170435033 }, "_registered": true, "_dependencies": [], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "jessicagliozzo", "count": 2, "uuid": 170435033 } ], "_userbio": { "uuid": 170435033, "type": "user", "name": "JessicaGliozzo" }, "_downloads": { "count": 535, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/NetInt" }, "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NetInt.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_realowner": "jessicagliozzo", "_cranurl": false, "_releases": [ { "version": "1.0.0", "date": "2022-09-29" }, { "version": "1.0.1", "date": "2025-05-03" } ], "_exports": [ "align.networks", "ATLEASTK.int", "lalign.networks", "MAX.int", "MIN.int", "MS.UA.int", "PUA.int", "UA.int", "WA.int", "WAP.int" ], "_help": [ { "page": "align.networks", "title": "Function to align the adjacency matrices of graphs/networks", "topics": [ "align.networks" ] }, { "page": "ATLEASTK.int", "title": "ATLEASTK network integration", "topics": [ "ATLEASTK.int" ] }, { "page": "lalign.networks", "title": "Function to align a list of adjacency matrices of graphs/networks", "topics": [ "lalign.networks" ] }, { "page": "MAX.int", "title": "Maximum (MAX) network integration", "topics": [ "MAX.int" ] }, { "page": "MIN.int", "title": "Minimum (MIN) network integration", "topics": [ "MIN.int" ] }, { "page": "MS.UA.int", "title": "\"Memory Saving\" Unweighted Average (UA) network integration", "topics": [ "MS.UA.int" ] }, { "page": "PUA.int", "title": "Per-edge Unweighted Average (PUA) network integration", "topics": [ "PUA.int" ] }, { "page": "UA.int", "title": "Unweighted Average (UA) network integration", "topics": [ "UA.int" ] }, { "page": "WA.int", "title": "Weighted Average (WA) network integration", "topics": [ "WA.int" ] }, { "page": "WAP.int", "title": "Weighted Average Per-class (WAP) network integration", "topics": [ "WAP.int" ] } ], "_readme": "https://github.com/cran/NetInt/raw/HEAD/README.md", "_rundeps": [], "_score": 1.6989700043360187, "_indexed": true, "_nocasepkg": "netint", "_universes": [ "jessicagliozzo" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.1", "date": "2026-06-04T11:01:41.000Z", "distro": "noble", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "abc57f81d954f9e34ead288b4c5e01ae37f929c65897871189e18107ba8a02d3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" }, { "r": "4.6.0", "os": "linux", "version": "1.0.1", "date": "2026-06-04T11:01:19.000Z", "distro": "noble", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "136daae5f4b0fff18b750fa2a75d452de9d634a7873365f0e1f66b4d18432656", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" }, { "r": "4.5.3", "os": "mac", "version": "1.0.1", "date": "2026-06-04T11:01:56.000Z", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "9c3e3a5c1879989484758db05fd56b2d17492716710e41360b04d9991b969700", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" }, { "r": "4.6.0", "os": "mac", "version": "1.0.1", "date": "2026-06-04T11:01:25.000Z", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "53ada2d97ec7176af6ceebb1f188b9d8961a2506b810fcb1697415d675abe670", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.1", "date": "2026-06-04T11:01:24.000Z", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "b25ad327f5349bec93e3dba8f200ad46dafd8d159534a4d9e6127cebfd1d0406", "status": "success", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" }, { "r": "4.7.0", "os": "win", "version": "1.0.1", "date": "2026-06-04T11:01:04.000Z", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "8ea90280c4de0b32b571a6f78c67476a9951dcc2cd33d5d495e6a124fc35b308", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" }, { "r": "4.5.3", "os": "win", "version": "1.0.1", "date": "2026-06-04T11:00:34.000Z", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "a95303d2de40aca4023d408a1bab5dde04cb5d65d9573dd2b35e96197de7dd17", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" }, { "r": "4.6.0", "os": "win", "version": "1.0.1", "date": "2026-06-04T11:00:35.000Z", "commit": "60d89f011f7cba58a1c2b132fa2deb2c6a4e36bb", "fileid": "574e05a7e796fba0a8dc04f838d404729ef1aa2e0f3acedde629511ca09ff55d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jessicagliozzo/actions/runs/26947489835" } ] }